Insertion junction: CLIP2.025500_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025500
Chromosome:chromosome 7
Location:6365075
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g357400 (1 of 1) IPR000571//IPR001623 - Zinc finger, CCCH-type // DnaJ domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACTCACACACTCATGCTATCATACATGCGGCTTCACCCCAGCTCTCTC
Internal bar code:GCATCTGACGGGGAGGCAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:53
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTATTGGCTGCGTGACCTGA
Suggested primer 2:CATACGACTCCTCCTGACGC