Insertion junction: CLIP2.025503_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.025503
Chromosome:chromosome 17
Location:3834243
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727400 HRP8 Hydroxyproline-rich glycoprotein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCACGAGGTGGCGCAGTTCGTGGACTGCCTGGCGGACGTGGCCTGGT
Internal bar code:TTGTCGCGCAAAAACGCTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:417
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTATGGTACTGCTGCCG
Suggested primer 2:ATGGCATGGCATGGTGTACA