Insertion junction: CLIP2.025505_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025505
Chromosome:chromosome 3
Location:1442838
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151100 SSA15 cilia-sensing, structure and/or assembly; (1 of 2) PTHR22904//PTHR22904:SF312 - TPR REPEAT CONTAINING PROTEIN // CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCGGTGCTGCGTGCCGCGCTCCGCGTCGGAGGCGGTGCGCTGCGTGG
Internal bar code:TCTGCGTCGCATTAGACTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2239
LEAP-Seq percent confirming:91.4286
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTGTCCTCTTTTGGGGG
Suggested primer 2:GGAGACATGCCAAGGACCTC