Insertion junction: CLIP2.025508_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025508
Chromosome:chromosome 4
Location:3310425
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g227000 MLH2 DNA mismatch repair protein; (1 of 1) K10858 - DNA mismatch repair protein PMS2 (PMS2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTTGGGTTTGGGTGTAGGCGAGGGTGTAGGCAGGTGAGGGTGCACCC
Internal bar code:GAGAATTGTAATAGGGGAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:232
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCTCCTTCCTGAACCAT
Suggested primer 2:TCGGTCTTACTACCACCCGT