Insertion junction: CLIP2.025520_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025520
Chromosome:chromosome 12
Location:6663765
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAATGGTAACTTCCTGCTGGTAACCCATTGTTATGTGGCTCCTGCCCAG
Internal bar code:TAGTGCGGAGTCTGGAAATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2989
LEAP-Seq percent confirming:6.25
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGGCACACCTTGACACG
Suggested primer 2:CATGACTAAATTGCCCGCGG