Insertion junction: CLIP2.025534_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025534
Chromosome:chromosome 13
Location:2602147
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580800 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACTGCCGCCTCGTTGGCGCCCCACCACCACGGTGCCCTACGCGGCGT
Internal bar code:CTGTAAATTGAGCGGCTACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4886
LEAP-Seq percent confirming:72.4138
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCGTCCATGTCTTCGCA
Suggested primer 2:CATAGCGACACGTGTGCATG