Insertion junction: CLIP2.025536_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.025536
Chromosome:chromosome 16
Location:4931565
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686650 (1 of 1) PTHR31057//PTHR31057:SF0 - FAMILY NOT NAMED // E3 UFM1-PROTEIN LIGASE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAAAGAGCGAGAAGGAGCAAGGGGGGGTAGTCTCCAGAGAGAACGGAG
Internal bar code:CCTACGATGGGTGGGCCCTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1076
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTCCTCAATGAGTGTGGC
Suggested primer 2:ATGGCGAGCTGATCACTACG