Insertion junction: CLIP2.025538_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025538
Chromosome:chromosome 17
Location:2592958
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716350 GT90F32,GT90-32 GT90 family protein 32; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCGACCTACCCTTCTTGGAGGACGTGCACATCAAGCAGGTGCGAGGC
Internal bar code:GGATAGAAGCTTAGGCGGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1088
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGTGCATGTGTGTGTGT
Suggested primer 2:GGGGTAAGGCATTGTGCTCT