Insertion junction: CLIP2.025538_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025538
Chromosome:chromosome 17
Location:2592969
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716350 GT90F32,GT90-32 GT90 family protein 32; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCGCGCGACCGAAACGTGTGCATGGCGCCCACCGCCAGCGCTACTAC
Internal bar code:GGATAGAAGCTTAGGCGGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1329
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTAAGGCATTGTGCTCT
Suggested primer 2:GCATGTGCATGTGTGTGTGT