Insertion junction: CLIP2.025539_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.025539
Chromosome:chromosome 3
Location:8073455
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201301 (1 of 2) IPR000104//IPR000945//IPR020683 - Antifreeze protein, type I // Dopamine beta-hydroxylase-related // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAATCACAGCAGGCACTACCTCTTCTGTGCCGCAGGTCGACGGCCTG
Internal bar code:GTTCGGTTTCGCGTTTAGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:270
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTGGCGGTGTCATTTTGC
Suggested primer 2:GAGTCAAGCCAGTCTGGGAC