Insertion junction: CLIP2.025550_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025550
Chromosome:chromosome 10
Location:5407860
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457297 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAGGAAATGCTGGACTTTGCCGTGCGCTGCGGTCAGGTGCGTTTAGG
Internal bar code:AACGAAGAGAAGGCGTGCGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4848
LEAP-Seq percent confirming:96.1039
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCAGTGCTTCCATCAGT
Suggested primer 2:TGGAAGCCGAGCCGTTTAAT