Insertion junction: CLIP2.025552_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025552
Chromosome:chromosome 3
Location:2370442
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158400 FAP218 Flagellar Associated Protein 218; (1 of 1) IPR023160 - Ribonuclease HII, helix-loop-helix cap domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATGGCAGACATGGCGTGTGCGGAGGCGGCCGCGCGGCCCTCGGCCAG
Internal bar code:GTTTTCTATTTACTATATAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3498
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTGAGGTGGTGCAATGCG
Suggested primer 2:GGCTTTCTTACTCCACCCCC