Insertion junction: CLIP2.025552_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025552
Chromosome:chromosome 13
Location:2056376
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576800 PHX21,HIF1,HIF (1 of 1) K09592 - hypoxia-inducible factor prolyl hydroxylase (EGLN, HPH); Cytosolic prolyl 4-hydroxylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGAATTGGGGAGGACACGGGGCAGGCACCCCTGCCTCGGGAGTAGGGA
Internal bar code:TCTTTAGTGTACGACATTGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:563
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTACCATCCCCGCATTTCCC
Suggested primer 2:TGATGCAGGCACATGGTCAT