Insertion junction: CLIP2.025552_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.025552
Chromosome:chromosome 13
Location:2056377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576800 PHX21,HIF1,HIF (1 of 1) K09592 - hypoxia-inducible factor prolyl hydroxylase (EGLN, HPH); Cytosolic prolyl 4-hydroxylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCACACATGCCTGGCCCCGTGCCCTCGCGCCCCCGCGGTCCGGCAGGG
Internal bar code:TGGCCGCGTGGGCGGTAGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2388
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGCAGGCACATGGTCAT
Suggested primer 2:TTACCATCCCCGCATTTCCC