Insertion junction: CLIP2.025557_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025557
Chromosome:chromosome 1
Location:4923053
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00004889

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGACGCCACATGAATTGCCAATCCGCCCTCGTTTACCATACGCGTTCTT
Internal bar code:ACCTCGTTAGGCTGCCATGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1532
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGACCTGAACGAAGACA
Suggested primer 2:TGGGGGTCATGATGGAGGAT