Insertion junction: CLIP2.025557_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025557
Chromosome:chromosome 1
Location:4923060
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00004889

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGAGGTAGCCCTAGCCCGTGGCCCCAGCCGGCTGGTCCCCTCTCCCCTT
Internal bar code:ACCTCGTTAGGCTGCCATGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3974
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:102
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGGGTCATGATGGAGGAT
Suggested primer 2:CACGGACCTGAACGAAGACA