Insertion junction: CLIP2.025564_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025564
Chromosome:chromosome 10
Location:2598549
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g436800 (1 of 2) PF01833//PF07691//PF10162 - IPT/TIG domain (TIG) // PA14 domain (PA14) // G8 domain (G8) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGCTGAAGTTGCCAATCTGCATCCAGGGCGTGTTCCACCGCGTAAGA
Internal bar code:GTGGGGCCATTTAGCTGTGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5131
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCGTTGAATTGCGCATAT
Suggested primer 2:GATAAACACCGACATGCCGC