Insertion junction: CLIP2.025571_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.025571
Chromosome:chromosome 2
Location:4666372
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g107700 (1 of 2) IPR001611//IPR001810//IPR003591 - Leucine-rich repeat // F-box domain // Leucine-rich repeat, typical subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCATTTGCTATGTTAGGAAGCCAAAACCGCCCGCTCTTGGCAGCACGT
Internal bar code:TAACTGTCTCCATATGAAAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:983
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGCAGAAGGGGAGTAGG
Suggested primer 2:GCCGGCGCTACTACAAGTAT