Insertion junction: CLIP2.025578_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025578
Chromosome:chromosome 13
Location:831561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567200 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGCCTGCCATGCATCCAGCGCTTCGCGCCGTACGGGTGCGCGGTGGGA
Internal bar code:TAATGAGATGCTAGTACGACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:722
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCGTTGTGCAGCAGAAGC
Suggested primer 2:CCAAAGCTCCAACCATCCCT