Insertion junction: CLIP2.025584_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025584
Chromosome:chromosome 12
Location:3012659
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501850 FFT1 putative fructan fructosyltransferase; (1 of 2) PTHR31953//PTHR31953:SF1 - FAMILY NOT NAMED // BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV2-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGCAGCAGCAGCGGCTACTGCTGCTGCTGCAGCTGTGGCGGCTGTAGC
Internal bar code:TTGAGGACCTAGGTCTTTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1076
LEAP-Seq percent confirming:13.0435
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGACAGCGGTGGTTCTG
Suggested primer 2:AGGTGAGTATGATTGCGCGT