Insertion junction: CLIP2.025588_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025588
Chromosome:chromosome 13
Location:953617
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568100 (1 of 4) 3.4.21.19 - Glutamyl endopeptidase / V8 proteinase outside_mRNA
Cre13.g568150 CMAL1,SMM45,CMAL S-adenosyl-L-methionine-dependent methyltransferase; (1 of 1) 2.1.1.199 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTCCTAGGCTCCCCGCAGCCTGGCAGCCTGCCAACCCTAACTGTCAA
Internal bar code:GCGGTAATCTACTCTCCACTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:692
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGGAGTGGCTGTGTTGAC
Suggested primer 2:AGCTCGTCCAGAAAAGCGAA