Insertion junction: CLIP2.025599_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.025599
Chromosome:chromosome 2
Location:4913288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110000 (1 of 1) PF07974//PF13920 - EGF-like domain (EGF_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGTTGACCTAAGCTGCACCGCTGGCACAGTTCTCGTCCGTCCGCCGC
Internal bar code:AGGAATTAGATATTCGGCAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:693
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ATACTACGGTAGGCATGCGC
Suggested primer 2:CAGGATGGAGGTGCAACAGT