Insertion junction: CLIP2.025623_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025623
Chromosome:chromosome 3
Location:3900374
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170700 (1 of 3) 3.2.1.39 - Glucan endo-1,3-beta-D-glucosidase / Laminarinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCAGCAGCACAGCGGTGGCGCGGTGCCCAAGCAGGGCCCCCCAATGG
Internal bar code:ATGGCCAGGGGCGGATCCGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5282
LEAP-Seq percent confirming:98.75
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:TACACACGCGACCGAAAGAA
Suggested primer 2:TCTCCGCAATGTCGATCTCG