Insertion junction: CLIP2.025627_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.025627
Chromosome:chromosome 16
Location:692244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691400 (1 of 102) PF01753 - MYND finger (zf-MYND) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGCGGGCTTCCCAGAGCTCGTTGCAGAGCCATTGGTGCGGCCGGCGG
Internal bar code:TCGGGAGTATTCGTCTTAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1107
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGTTGATGCTGCGATC
Suggested primer 2:GGGATGAAGGGAGAGGTCCT