Insertion junction: CLIP2.025635_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025635
Chromosome:chromosome 12
Location:7736277
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554650 REC8 cohesin complex subunit, putative meiotic isoform; (1 of 3) PF04824 - Conserved region of Rad21 / Rec8 like protein (Rad21_Rec8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACGACGACATGTTCCCCATGCTCAACGACCCCAACGACCTGGCCATGC
Internal bar code:TCCACCGTTGGGCTACGTTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3390
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACTTCGTGTGGTGATGG
Suggested primer 2:CTGGGGTGCGGTATCAAGTT