Insertion junction: CLIP2.025648_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025648
Chromosome:chromosome 9
Location:2675773
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801021 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGCTGTGTCCAGTCAGTCTCCCACCCAGGCCCTGGGGAGTATGAACCC
Internal bar code:GGAGTTGTAACTTAGCTCATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1451
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGACAGTGACAGTGACC
Suggested primer 2:AGTGAAAGCGAGGGTAGTGC