Insertion junction: CLIP2.025670_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025670
Chromosome:chromosome 14
Location:3334893
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g629550 (1 of 1) K06963 - tRNA acetyltransferase TAN1 (TAN1, THUMPD1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATCACAAGCAGGAGCAATGCTGTCGTGGCACGTGCGCCCCGATCCTG
Internal bar code:TTGTTTGAAAGCTAGGTGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1511
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGGGCCAATAGCTGATAG
Suggested primer 2:CTATTGAGCCGACATCGCCT