Insertion junction: CLIP2.025682_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025682
Chromosome:chromosome 3
Location:273555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144404 (1 of 14) PF03133 - Tubulin-tyrosine ligase family (TTL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTAATTTCGCTCCTCACCGACTCGTATTCGCATATCTCACGACCCCTTT
Internal bar code:GCGCGGAGTGCTTGCGCGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:737
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCTACACTGGGCACGTC
Suggested primer 2:GTCGCAAGCGTTCAAACCAT