Insertion junction: CLIP2.025687_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.025687
Chromosome:chromosome 1
Location:3854088
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025350 FAP235 (1 of 3) PF03703 - Bacterial PH domain (bPH_2); Flagellar Associated Protein 235 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATCCTGTGTGGTAGGCTCCGACACTGTTTAACGTATGCAGTACCGTAA
Internal bar code:TAGCTTGGCAGTGGGTGGCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:506
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AACTCGTTGGGCGTGATGAT
Suggested primer 2:CGCGTTTCACCGACAAACTT