Insertion junction: CLIP2.025699_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.025699
Chromosome:chromosome 6
Location:3117198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275450 (1 of 1) PF00069//PF13855 - Protein kinase domain (Pkinase) // Leucine rich repeat (LRR_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTC
Internal bar code:GCGGGTTGTAGGAGTATGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1504
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GATCCAGCTTCATCCGAGGG
Suggested primer 2:CGTGAGAAGGAAGCTTGGGT