Insertion junction: CLIP2.025701_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025701
Chromosome:chromosome 12
Location:5999422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534300 (1 of 781) IPR000104 - Antifreeze protein, type I CDS
Cre12.g534302 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCGGTGGGTCGCATAGAAGATTTCATGTGTATCCTCTCTTATTTAGC
Internal bar code:TGGTTTGGAGGGCGGTAAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:6451
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAACACTGCGGACACACC
Suggested primer 2:GCAGTCATATGTGCAGCAGC