Insertion junction: CLIP2.025705_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.025705
Chromosome:chromosome 17
Location:504252
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699200 (1 of 1) IPR000104//IPR000626//IPR029071 - Antifreeze protein, type I // Ubiquitin domain // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCGCACCTCTGTGACGCTCGCCTTCAGCCCCTAGCCCCGCCTATACA
Internal bar code:ACAGTAATCCCTCTCCTGCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3031
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:CTATTGCATGGACGCGTGTG
Suggested primer 2:TGCTAGATGTCATTGGGCCC