Insertion junction: CLIP2.025707_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025707
Chromosome:chromosome 7
Location:2020218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800787 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACATGAGCACGCATGTGCGCGTGTCGCTCAGCTGTCCCGTTGCCCCCCA
Internal bar code:TATAGAGTTCGAGCCCCCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:710
LEAP-Seq percent confirming:80.7692
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCAGGCTACAGTGTAGC
Suggested primer 2:CGGACAGCGCTGATACTAGG