Insertion junction: CLIP2.025721_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.025721
Chromosome:chromosome 3
Location:927142
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146607 (1 of 173) IPR029058 - Alpha/Beta hydrolase fold mRNA_edge/3'UTR
Cre03.g146627 (1 of 1) PTHR20852:SF16 - TYPE-1 GLUTAMINE SYNTHETASE 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGGGGCACATTCGCGACAGTCTATCGAGCGGACTGAACGGACGTCTA
Internal bar code:GGTTTTGTTGCTTTTCGTCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:593
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTCGTGTGTTTCTTGCGT
Suggested primer 2:TAAGCGGTTGGAAGGACACC