Insertion junction: CLIP2.025725_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.025725
Chromosome:chromosome 9
Location:1299141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400750 AMT5,AMT1Ea,AMT1E Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCAGGGCTCAATGACGGAGCAGCCCGACGTCACCGCCACCAGGCCTG
Internal bar code:ATGTTCCCCCGTACAAGAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:775
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTCTTTCCTTCCTCACA
Suggested primer 2:GGGCAAGGGAAATGACTGGA