Insertion junction: CLIP2.025728_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025728
Chromosome:chromosome 16
Location:7958756
Confidence (%):63
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00188039

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGACAGACGTGTGGCTCCAGCAGGCGCGTGGCGGCTTGTGGTCGGAT
Internal bar code:GTGGTACGTGATATAATTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1712
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GACATGGGGCCAGTATACGG
Suggested primer 2:GACTCCGTTCGTCTGTGTGT