Insertion junction: CLIP2.025730_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.025730
Chromosome:chromosome 5
Location:1332270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241655 (1 of 24) IPR001478 - PDZ domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGAGAATGGTGCGGTGGGACGAGGGCGGGATCGACTTGGGAAGGTGTG
Internal bar code:CCTAATCAGAGGGAGTACCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:986
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TACCGTTTCGTTTCGACCGT
Suggested primer 2:GGCACTACTGCTGCTCTTGA