Insertion junction: CLIP2.025750_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.025750
Chromosome:chromosome 2
Location:4232704
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g104400 (1 of 1) IPR000104//IPR005033 - Antifreeze protein, type I // YEATS CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACACTCAACCGCGCAACCGGCAGGGCTGCTGGCGGCCTTGCCTGCTGC
Internal bar code:GCACGCAGTCTGGTGATCGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3588
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATGTTCTGCATCGCTTG
Suggested primer 2:GACAACGTACAGGAAGCCCA