Insertion junction: CLIP2.025753_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.025753
Chromosome:chromosome 6
Location:5796244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289000 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCTGGCAAAGCTGGCAGCAGCGCAAGCGGTGAGGCCAGACCACATAA
Internal bar code:GGCTCCAAGGGGAGTATCGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3312
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACGACCACGGGTGAAAA
Suggested primer 2:TCATGCACCTGCGTAACCTT