Insertion junction: CLIP2.025759_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.025759
Chromosome:chromosome 13
Location:2666828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581350 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGCTCGCCAGCATGCCCAGCTGCCTGCCGCCGCCTCCACTGCCGCCAC
Internal bar code:AATCGGAACTGACGTAATTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1153
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTAGTACGTGCTCTGCA
Suggested primer 2:GACCTTATAGACGCGCTGCT