Insertion junction: CLIP2.025761_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025761
Chromosome:chromosome 3
Location:8152028
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200700 FAP166 (1 of 79) IPR011992 - EF-hand domain pair; Flagellar Associated Protein 166 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGCCCCCACATGCCACTACCGCATCGTCCCCATCAACGTAGCTCCAC
Internal bar code:GCGCCCACATATACCATCACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1023
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTGAAGGCTTTCAGTCC
Suggested primer 2:CACGCCTACTCGACATCTCC