Insertion junction: CLIP2.025765_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025765
Chromosome:chromosome 16
Location:4401933
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g668400 (1 of 1) PTHR23354//PTHR23354:SF72 - NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED // PROTEIN LMD-3, ISOFORM A CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATGCTGCAGCGCCAGTGACCGGTTGATGTAGCACCACGCAGACAGGA
Internal bar code:GCTTATTTTACAGAATTTATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4774
LEAP-Seq percent confirming:98.0769
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGATGTGGACAGGTGGGG
Suggested primer 2:ATAGTGACGATCGCGCACAT