Insertion junction: CLIP2.025765_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025765
Chromosome:chromosome 16
Location:4401935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g668400 (1 of 1) PTHR23354//PTHR23354:SF72 - NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED // PROTEIN LMD-3, ISOFORM A CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCGGGTGAGCGCGGCTTTTGCATGGGAGCGCTTGGGCCCATCACGGTC
Internal bar code:GCTTATTTTACAGAATTTATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1102
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGTGACGATCGCGCACAT
Suggested primer 2:TTTGATGTGGACAGGTGGGG