Insertion junction: CLIP2.025776_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025776
Chromosome:chromosome 16
Location:6491119
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674850 (1 of 1) PTHR14625//PTHR14625:SF3 - MICROCEPHALIN // MICROCEPHALIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTCCCTGGCGAATACAAGTGTAGCACCGGCGGCAACGTTGGTCCTTAA
Internal bar code:GGGGCTCAGAGACTTCGGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1809
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTCTGCTGAAGCCACTG
Suggested primer 2:ATGTTTGACGGGCCATTTGC