Insertion junction: CLIP2.025776_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025776
Chromosome:chromosome 16
Location:6491120
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674850 (1 of 1) PTHR14625//PTHR14625:SF3 - MICROCEPHALIN // MICROCEPHALIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGCGCAACACCGGAAACCGAGTGTGGCTGTGCGCCAGCACGCAGCAC
Internal bar code:GGGGCTCAGAGACTTCGGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1174
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTTGACGGGCCATTTGC
Suggested primer 2:TTCCTCTGCTGAAGCCACTG