Insertion junction: CLIP2.025778_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025778
Chromosome:chromosome 11
Location:974446
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467663 (1 of 1) IPR002909//IPR014756//IPR019316 - IPT domain // Immunoglobulin E-set // G8 domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCAGAACTCGGCCAGAAGCAGCCCAGTCAGCGGTGGGGCGCGGCATGT
Internal bar code:AGTGCTGTCCTTCGCTTGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3664
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGGGAGGGGCTTTTTGT
Suggested primer 2:TGCGATCCGTGAGAATACCG