Insertion junction: CLIP2.025779_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.025779
Chromosome:chromosome 12
Location:5720122
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532300 APG10,ATG10 Autophagy-related protein; (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCTTGTTCTATCACCTAGCAGCAGCAGAACATGCAAACCCGATCCACG
Internal bar code:GAACACTCTCGACCGCAGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1568
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTTGGTTGGCACGATACA
Suggested primer 2:CCTTCTCGTGCTCGTTGTCT