Insertion junction: CLIP2.025779_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025779
Chromosome:chromosome 12
Location:5720125
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532300 APG10,ATG10 Autophagy-related protein; (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCTTGCGCTAGGGCGCTGGCGCTGATGCATGGACAGCTCCGACATCG
Internal bar code:GCAGGGTGGGATACAGGAGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1178
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCTCGTGCTCGTTGTCT
Suggested primer 2:AGCTTGGTTGGCACGATACA