Insertion junction: CLIP2.025790_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025790
Chromosome:chromosome 2
Location:5824302
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00041141

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCCACCACCCTCTCACTGCCCTCAGTTTACGCACTCGTGAAGTCTCT
Internal bar code:CCTTAACGGGCCTATATTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2287
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:103
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:103

Suggested primers for confirmation by PCR

Suggested primer 1:AAATCGGTCGAGCGGAAAGT
Suggested primer 2:CGTCCGTATAGCCCATGCAT