Insertion junction: CLIP2.025790_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025790
Chromosome:chromosome 2
Location:5824304
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00041141

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGGATGGCTGCCATAAGCAAACACGTAGGCACGCGCGGGTGGCTTGGG
Internal bar code:CCAGATATTGAGTTACGTGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1721
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCGTATAGCCCATGCAT
Suggested primer 2:AAATCGGTCGAGCGGAAAGT